Web(PsiCSI, NMR), score protein structure decoys (SCORE), assign proteins to particular functional categories and predict functionally important residues (MFS, FSSA); predict protein ion binding sites, types, affinities, and specificities from structure WebShare your videos with friends, family, and the world

CSI 3.0: a web server for identifying secondary and super …

WebPsiCSI is a highly accurate and automated method of assigning secondary structure from NMR data, which is a useful intermediate step in the determination of tertiary structures. The method combines information from chemical shifts and protein sequence using three layers of neural networks. WebMay 15, 2015 · These include PSSI , PsiCSI , PLATON , PECAN and 2DCSi . Most of these newer methods extend the basic CSI protocol by including more sophisticated chemical shift models or more elaborate statistical calculations. For instance, the developers of PSSI chose to discard CSI's simplistic digital filter and replace it with a sophisticated joint ... how much is northwestern tuition

Become a Member - Psi Chi, The International Honor …

WebPROTINFO: new algorithms for enhanced protein structure predictions Ling-Hong Hung, Shing-Chung Ngan, Tianyun Liu and Ram Samudrala* Computational Genomics Group, Department of Microbiology, University of Washington School of Medicine, WebPsiCSI uses neural networks to translate chemical shifts to secondary structure information and combine it with sequence based prediction algorithms (PsiPred). For a rigorously jack-knifed set of 92 proteins, PsiCSI made 36% fewer errors than CSI, achieving a sustained 3-state accuracy of 89%. In addition, because of the sequence based ... WebThe Bioverse framework performs analyses and predictions based on genomic sequence data to annotate and understand the interaction of protein sequence, structure, and function, both at the single molecule as well as at the systems levels. The framework was used to annotate the finished rice genome sequence published in 2005. [21] how do i clean up my hp laptop